Spaghetti Squash Au Gratin
This creamy Spaghetti Squash Au Gratin is what happens when comfort food meets a healthy makeover A golden, bubbly crust over tender squash strands smothered in a luxurious cheese sauce it’s mac and cheese vibes, with way more veggies and none of the guilt!
Prep Time: 20 min
Cook Time: 70 min
Total Time: 90 min
Servings: 6–8
Ingredients
- 1 large spaghetti squash (about 3–4 lbs)
- 4 tbsp unsalted butter, divided
- 1 medium yellow onion, finely chopped
- 2 cloves garlic, minced
- 4 tbsp all-purpose flour
- 3 cups whole milk
- ½ tsp salt, plus more to taste
- ¼ tsp black pepper
- ¼ tsp nutmeg
- 1 cup grated Gruyere cheese, divided
- 1 cup grated sharp cheddar cheese, divided
- ½ cup grated Parmesan cheese, divided
- ¼ cup panko breadcrumbs
- 2 tbsp chopped fresh parsley (optional for garnish)
Step-by-Step Instructions
Roast the Squash
- Preheat oven to 400°F (200°C).
- Cut squash in half lengthwise, scoop out seeds.
- Brush with 2 tbsp melted butter and season with salt & pepper.
- Place cut-side down on parchment-lined baking sheet and roast for 45–60 minutes.
- Once cooled slightly, fluff the strands with a fork.
Make the Cheese Sauce
- In a large saucepan, melt 2 tbsp butter over medium heat.
- Sauté onion until soft (5–7 min), then add garlic for 1 min.
- Stir in flour and cook for 2 min to form a roux.
- Slowly whisk in milk, stirring constantly.
- Simmer until slightly thickened (5–7 min).
- Add salt, pepper, nutmeg, then stir in ¾ cup each of Gruyere, cheddar, and ¼ cup Parmesan. Remove from heat.
Assemble + Bake
- Combine squash strands with cheese sauce and pour into a greased 9×13″ baking dish.
- In a bowl, mix remaining cheeses and breadcrumbs. Sprinkle over the top.
- Bake at 400°F for 20–25 minutes until bubbly and golden.
- Let rest for 5–10 min before serving. Garnish with parsley
Pro Tips
- Season to taste: Always taste your sauce before baking.
- Use quality cheese: Gruyere and sharp cheddar bring max flavor.
- Make it a meal: Add cooked bacon, chicken, or sausage.
Nutrition Information (Per Serving – Approx.)
| Calories | Protein | Carbs | Fat | Fiber | Sugar |
|---|---|---|---|---|---|
| 400 | 18g | 25g | 26g | 6g | 9g |
Disclaimer:
Nutrition is estimated using online tools and may vary based on ingredients used.

Spaghetti Squash Au Gratin
This creamy Spaghetti Squash Au Gratin is a healthy take on comfort food with a golden crust and a luxurious cheese sauce, perfect for veggie lovers.
Ingredients
Method
Roast the Squash
- Preheat oven to 400°F (200°C).
- Cut squash in half lengthwise, scoop out seeds.
- Brush with 2 tbsp melted butter and season with salt & pepper.
- Place cut-side down on parchment-lined baking sheet and roast for 45–60 minutes.
- Once cooled slightly, fluff the strands with a fork.
Make the Cheese Sauce
- In a large saucepan, melt 2 tbsp butter over medium heat.
- Sauté onion until soft (5–7 min), then add garlic for 1 min.
- Stir in flour and cook for 2 min to form a roux.
- Slowly whisk in milk, stirring constantly.
- Simmer until slightly thickened (5–7 min).
- Add salt, pepper, nutmeg, then stir in ¾ cup each of Gruyere, cheddar, and ¼ cup Parmesan. Remove from heat.
Assemble + Bake
- Combine squash strands with cheese sauce and pour into a greased 9×13” baking dish.
- In a bowl, mix remaining cheeses and breadcrumbs. Sprinkle over the top.
- Bake at 400°F for 20–25 minutes until bubbly and golden.
- Let rest for 5–10 min before serving. Garnish with parsley.
Nutrition
Notes
Season to taste: Always taste your sauce before baking. Use quality cheese: Gruyere and sharp cheddar bring max flavor. Make it a meal: Add cooked bacon, chicken, or sausage.





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